PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67147.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 239aa    MW: 26574.4 Da    PI: 6.1729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67147.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.6e-08163210455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++ Lq
  EPS67147.1 163 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQALQ 210
                 8*************************9....788888999999999999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.79E-8157214No hitNo description
SuperFamilySSF474591.83E-15157230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.386159209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-14159225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-6163210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-8165215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MEPAVVEAQF RSAPKDGEEM GFVLDEIQGL ISVPPETESS SFTALLELPP PKAVELLVKE  60
DFTDEHPICP SDFAVASMFS VFPAASTENS LESTVIFSRM VKQEPLDPHP HSCSDKTVNP  120
SKRKHKEKQV KESNKKIKKA GGANDEKLPY VHVRARRGQA TDSHSLAERA RREKINARMK  180
LLQELVPGCN KISGTALVLD EIINHVQALQ RQVEFLSMRI AAVDPRIDFP PFDCLLPPE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078862.17e-88PREDICTED: transcription factor bHLH48-like isoform X1
RefseqXP_011078863.17e-88PREDICTED: transcription factor bHLH48-like isoform X2
SwissprotQ8VZ022e-54BH048_ARATH; Transcription factor bHLH48
TrEMBLS8E4B11e-175S8E4B1_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc10g079070.1.13e-66(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40292342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-56bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]